Report Type: Expression Report Date: 12:43PM 11/08/2008 ______________________________________________________________________ Filename: Arabidopsis hGSC4.CHP Probe Array Type: ATH1-121501 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.090 Scale Factor (SF): 14.102 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 31.52 Std: 0.30 Min: 31.00 Max: 32.70 Noise: Avg: 0.90 Std: 0.04 Min: 0.80 Max: 1.00 Corner+ Avg: 61 Count: 32 Corner- Avg: 11399 Count: 32 Central- Avg: 9750 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 22810 Number Present: 11952 52.4% Number Absent: 10565 46.3% Number Marginal: 293 1.3% Average Signal (P): 1417.8 Average Signal (A): 33.8 Average Signal (M): 128.9 Average Signal (All): 760.2 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-R2-AT-ACTIN 11566.9 P 2021.6 P 12998.5 P 8862.32 1.12 AFFX-R2-AT-GAPDH 4858.4 P 8912.5 P 6885.45 1.83 AFFX-R2-AT-UBQ 4081.8 P 23424.8 P 13753.30 5.74 AFFX-ATHAL-ACTIN 261.5 P 1166.1 P 8250.4 P 3225.99 31.55 AFFX-ATHAL-GAPDH 1820.3 P 5293.9 P 16951.8 P 8021.99 9.31 AFFX-ATHAL-UBQ 2804.2 P 4380.9 P 21902.0 P 9695.72 7.81 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 4899.8 P 8428.4 P 7018.2 P 6782.11 1.43 AFFX-BIOC 15617.9 P 10682.1 P 13150.02 0.68 AFFX-BIOD 22502.5 P 42257.0 P 32379.73 1.88 AFFX-CRE 87618.6 P 115128.9 P 101373.75 1.31 AFFX-DAP 56.7 A 4.1 A 3.3 A 21.34 0.06 AFFX-LYS 2.7 A 52.5 A 2.2 A 19.13 0.80 AFFX-PHE 13.0 A 5.8 A 4.1 A 7.63 0.32 AFFX-THR 1.4 A 36.8 A 78.9 A 39.02 56.02 AFFX-TRP 7.8 A 27.0 A 8.7 A 14.50 1.11 AFFX-R2-EC-BIOB 8206.6 P 8981.0 P 9179.5 P 8789.04 1.12 AFFX-R2-EC-BIOC 21413.6 P 21974.5 P 21694.02 1.03 AFFX-R2-EC-BIOD 51003.2 P 62534.8 P 56768.98 1.23 AFFX-R2-P1-CRE 120137.9 P 136808.8 P 128473.35 1.14 AFFX-R2-BS-DAP 3.1 A 14.3 A 2.3 A 6.53 0.74 AFFX-R2-BS-LYS 5.8 A 3.6 A 19.4 A 9.60 3.34 AFFX-R2-BS-PHE 3.1 A 1.6 A 7.7 A 4.15 2.46 AFFX-R2-BS-THR 59.1 A 7.6 A 64.1 A 43.63 1.08 ______________________________________________________________________