Report Type:	Expression Report
Date:          	03:46PM 02/10/2009
______________________________________________________________________

Filename:		Arabidopsis lcWS-5.CHP
Probe Array Type:	ATH1-121501
Algorithm:		Statistical
Probe Pair Thr:	8
Controls:		Antisense
______________________________________________________________________

Alpha1:		0.05
Alpha2:		0.065
Tau:		0.015
Noise (RawQ):	1.080
Scale Factor (SF):	23.558
TGT Value:		500
Norm Factor (NF):	1.000
______________________________________________________________________

Background:
	Avg: 29.84	Std: 0.17	Min: 29.50	Max: 30.30
Noise:
	Avg: 0.91	Std: 0.03	Min: 0.80	Max: 1.00
Corner+
	Avg: 62		Count: 32
Corner-
	Avg: 11094		Count: 32
Central-
	Avg: 9281		Count: 9
______________________________________________________________________

The following data represents probe sets that exceed the probe pair threshold 
and are not called "No Call".

Total Probe Sets:	22810
Number Present:	11015	48.3%
Number Absent:	11404	50.0%
Number Marginal:	391	1.7%

Average Signal (P):	1666.0
Average Signal (A):	73.9
Average Signal (M):	227.1
Average Signal (All):	845.3
______________________________________________________________________

Housekeeping Controls:
Probe Set		Sig(5')	Det(5')	Sig(M')	Det(M')	Sig(3')	Det(3')	Sig(all)	Sig(3'/5')
AFFX-R2-AT-ACTIN	12595.1	P	4871.6	P	14429.7	P	10632.13	1.15
AFFX-R2-AT-GAPDH	15404.9	P	 	 	15893.1	P	15649.02	1.03
AFFX-R2-AT-UBQ	6273.3	P	 	 	32438.9	P	19356.09	5.17
AFFX-ATHAL-ACTIN	810.6	P	3522.7	P	7853.0	P	4062.09	9.69
AFFX-ATHAL-GAPDH	8255.0	P	16244.0	P	22436.6	P	15645.20	2.72
AFFX-ATHAL-UBQ	4124.4	P	5520.6	P	25779.7	P	11808.24	6.25
______________________________________________________________________

Spike Controls:
Probe Set		Sig(5')	Det(5')	Sig(M')	Det(M')	Sig(3')	Det(3')	Sig(all)	Sig(3'/5')
AFFX-BIOB		10294.5	P	15180.4	P	11846.8	P	12440.58	1.15
AFFX-BIOC		27155.9	P	 	 	16155.9	P	21655.90	0.59
AFFX-BIOD		35156.8	P	 	 	75974.8	P	55565.77	2.16
AFFX-CRE		186643.2	P	 	 	234515.6	P	210579.39	1.26
AFFX-DAP		77.2	A	8.4	A	31.0	A	38.89	0.40
AFFX-LYS		15.6	A	16.7	A	67.9	A	33.41	4.35
AFFX-PHE		47.1	A	7.7	A	40.3	A	31.71	0.86
AFFX-THR		5.0	A	40.4	A	182.1	P	75.87	36.10
AFFX-TRP		105.8	A	6.2	A	17.9	A	43.30	0.17
AFFX-R2-EC-BIOB	14257.9	P	13358.5	P	13427.0	P	13681.10	0.94
AFFX-R2-EC-BIOC	32526.2	P	 	 	38844.5	P	35685.37	1.19
AFFX-R2-EC-BIOD	70046.1	P	 	 	91888.4	P	80967.30	1.31
AFFX-R2-P1-CRE	231849.3	P	 	 	253184.6	P	242516.95	1.09
AFFX-R2-BS-DAP	42.4	A	38.2	A	11.2	A	30.62	0.26
AFFX-R2-BS-LYS	3.8	A	67.5	A	71.7	A	47.65	18.90
AFFX-R2-BS-PHE	20.8	A	8.5	A	15.0	A	14.75	0.72
AFFX-R2-BS-THR	70.7	A	12.0	A	141.3	A	74.69	2.00
______________________________________________________________________