Report Type:	Expression Report
Date:          	03:46PM 02/10/2009
______________________________________________________________________

Filename:		Arabidopsis gWS-2.CHP
Probe Array Type:	ATH1-121501
Algorithm:		Statistical
Probe Pair Thr:	8
Controls:		Antisense
______________________________________________________________________

Alpha1:		0.05
Alpha2:		0.065
Tau:		0.015
Noise (RawQ):	1.070
Scale Factor (SF):	12.340
TGT Value:		500
Norm Factor (NF):	1.000
______________________________________________________________________

Background:
	Avg: 29.19	Std: 0.18	Min: 28.80	Max: 29.80
Noise:
	Avg: 0.97	Std: 0.02	Min: 0.90	Max: 1.10
Corner+
	Avg: 82		Count: 32
Corner-
	Avg: 14786		Count: 32
Central-
	Avg: 12752		Count: 9
______________________________________________________________________

The following data represents probe sets that exceed the probe pair threshold 
and are not called "No Call".

Total Probe Sets:	22810
Number Present:	13053	57.2%
Number Absent:	9442	41.4%
Number Marginal:	315	1.4%

Average Signal (P):	1314.7
Average Signal (A):	45.8
Average Signal (M):	155.1
Average Signal (All):	773.4
______________________________________________________________________

Housekeeping Controls:
Probe Set		Sig(5')	Det(5')	Sig(M')	Det(M')	Sig(3')	Det(3')	Sig(all)	Sig(3'/5')
AFFX-R2-AT-ACTIN	11710.0	P	3494.0	P	11425.9	P	8876.64	0.98
AFFX-R2-AT-GAPDH	15020.5	P	 	 	12971.8	P	13996.16	0.86
AFFX-R2-AT-UBQ	6945.0	P	 	 	26943.1	P	16944.02	3.88
AFFX-ATHAL-ACTIN	693.6	P	2485.4	P	7691.0	P	3623.36	11.09
AFFX-ATHAL-GAPDH	6709.3	P	11156.6	P	20716.5	P	12860.80	3.09
AFFX-ATHAL-UBQ	4512.4	P	5845.2	P	20680.8	P	10346.13	4.58
______________________________________________________________________

Spike Controls:
Probe Set		Sig(5')	Det(5')	Sig(M')	Det(M')	Sig(3')	Det(3')	Sig(all)	Sig(3'/5')
AFFX-BIOB		6781.1	P	11209.1	P	8256.2	P	8748.82	1.22
AFFX-BIOC		17404.7	P	 	 	11559.4	P	14482.06	0.66
AFFX-BIOD		24764.9	P	 	 	51665.4	P	38215.18	2.09
AFFX-CRE		127403.4	P	 	 	148047.1	P	137725.23	1.16
AFFX-DAP		40.3	A	3.0	A	7.4	A	16.90	0.18
AFFX-LYS		46.8	A	14.2	A	5.5	A	22.15	0.12
AFFX-PHE		11.4	A	7.1	A	6.7	A	8.38	0.58
AFFX-THR		20.3	A	37.5	A	93.4	A	50.41	4.59
AFFX-TRP		50.7	A	2.8	A	19.1	A	24.21	0.38
AFFX-R2-EC-BIOB	10361.8	P	11689.4	P	10736.7	P	10929.31	1.04
AFFX-R2-EC-BIOC	21973.8	P	 	 	23186.6	P	22580.16	1.06
AFFX-R2-EC-BIOD	61659.4	P	 	 	70693.3	P	66176.35	1.15
AFFX-R2-P1-CRE	140439.1	P	 	 	166030.7	P	153234.89	1.18
AFFX-R2-BS-DAP	7.8	A	41.0	A	2.4	A	17.06	0.30
AFFX-R2-BS-LYS	37.5	A	16.9	A	6.2	A	20.21	0.17
AFFX-R2-BS-PHE	25.7	A	2.0	A	50.7	A	26.14	1.97
AFFX-R2-BS-THR	61.9	A	6.6	A	37.7	A	35.41	0.61
______________________________________________________________________