Report Type: Expression Report Date: 05:24PM 08/17/2007 ______________________________________________________________________ Filename: Soybean Ovule-Embryo Sac1.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.300 Scale Factor (SF): 26.141 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 40.69 Std: 0.70 Min: 39.30 Max: 42.60 Noise: Avg: 1.84 Std: 0.04 Min: 1.70 Max: 1.90 Corner+ Avg: 453 Count: 32 Corner- Avg: 15893 Count: 32 Central- Avg: 16852 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 12713 20.8% Number Absent: 47468 77.7% Number Marginal: 897 1.5% Average Signal (P): 4774.1 Average Signal (A): 144.5 Average Signal (M): 507.8 Average Signal (All): 1113.5 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 12289.7 P 17947.1 P 13370.9 P 14535.87 1.09 AFFX-BIOC 33911.2 P 28401.4 P 31156.32 0.84 AFFX-BIOD 56193.0 P 98401.5 P 77297.26 1.75 AFFX-CRE 252299.8 P 255026.0 P 253662.91 1.01 AFFX-DAP 168.1 A 77.8 A 30.9 A 92.27 0.18 AFFX-LYS 23.2 A 257.2 A 21.8 A 100.76 0.94 AFFX-PHE 9.9 A 14.5 A 37.5 A 20.66 3.78 AFFX-THR 35.1 A 143.6 A 65.6 A 81.44 1.87 AFFX-TRP 270.2 A 57.0 A 22.9 A 116.70 0.08 AFFX-R2-EC-BIOB 19216.6 P 19045.5 P 16659.3 P 18307.13 0.87 AFFX-R2-EC-BIOC 50957.5 P 47951.9 P 49454.66 0.94 AFFX-R2-EC-BIOD 127401.8 P 193493.5 P 160447.67 1.52 AFFX-R2-P1-CRE 252782.2 P 340326.5 P 296554.38 1.35 AFFX-R2-BS-DAP 98.3 A 29.5 A 11.8 A 46.57 0.12 AFFX-R2-BS-LYS 39.8 A 58.6 A 167.7 A 88.71 4.22 AFFX-R2-BS-PHE 15.1 A 172.6 A 185.0 A 124.25 12.24 AFFX-R2-BS-THR 298.3 A 33.4 A 228.9 A 186.88 0.77 ______________________________________________________________________