Report Type: Expression Report Date: 07:50PM 12/06/2006 ______________________________________________________________________ Filename: Soybean EP5.CHP Probe Array Type: Soybean Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.770 Scale Factor (SF): 14.283 TGT Value: 500 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 55.07 Std: 0.41 Min: 53.30 Max: 55.90 Noise: Avg: 2.60 Std: 0.06 Min: 2.50 Max: 2.80 Corner+ Avg: 826 Count: 32 Corner- Avg: 22700 Count: 32 Central- Avg: 24913 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 61078 Number Present: 15713 25.7% Number Absent: 44689 73.2% Number Marginal: 676 1.1% Average Signal (P): 3692.4 Average Signal (A): 86.1 Average Signal (M): 344.9 Average Signal (All): 1016.7 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BioB 7526.8 P 12935.6 P 8780.8 P 9747.71 1.17 AFFX-BioC 22205.3 P 18514.3 P 20359.77 0.83 AFFX-BioD 38162.3 P 64459.7 P 51310.98 1.69 AFFX-Cre 180512.1 P 178346.0 P 179429.03 0.99 AFFX-Dap 82.7 A 188.0 A 25.4 A 98.71 0.31 AFFX-Lys 111.3 A 22.1 A 19.3 A 50.90 0.17 AFFX-Phe 15.9 A 12.1 A 12.8 A 13.63 0.81 AFFX-Thr 10.2 A 7.8 A 10.5 A 9.47 1.03 AFFX-Trp 15.9 A 78.0 A 9.1 A 34.30 0.57 AFFX-r2-Ec-bioB 12989.4 P 14239.4 P 11469.4 P 12899.37 0.88 AFFX-r2-Ec-bioC 26623.6 P 25772.3 P 26197.98 0.97 AFFX-r2-Ec-bioD 92214.7 P 117724.1 P 104969.38 1.28 AFFX-r2-P1-cre 177339.4 P 226538.5 P 201938.94 1.28 AFFX-r2-Bs-dap 4.6 A 8.1 A 89.2 A 33.97 19.38 AFFX-r2-Bs-lys 21.9 A 3.8 A 171.1 P 65.61 7.81 AFFX-r2-Bs-phe 4.7 A 12.1 A 19.9 A 12.28 4.20 AFFX-r2-Bs-thr 124.8 A 21.2 A 7.5 A 51.17 0.06 ______________________________________________________________________